The sheet will not list the 4 speed because that was the standard option. You had to pay more for the automatic... at least that is from my understanding. Also, the PHS doesn't list ALL of the options for that car, it seems like thye just did a "pick and choose" which ones they listed.
The option codes that you listed, the important ones that add value is the W72, C60, AU3, A31, and WS6. The other ones are nice, but don't neccissarily add value.